Research Associate, Case Center for Imaging Research

Date: September 22, 2017

Title: Research Associate

Department: Case Center for Imaging Research

School: School of Medicine

Location: Wolstein Research Building 6131

Supervisor Name and Title: Pallavi Tiwari, PhD, Assistant Professor, Biomedical Engineering

 

POSITION OBJECTIVE

The Research Associate(RA) will carry out computational imaging and analytical research for our project which strives to develop a fully computerized risk predictor to assess benefit of adjuvant therapy in Lung Cancer. Research projects will involve dealing with large scale data sets and developing algorithms and computing technologies to process, extract features and analyze these digitized histology images using machine learning and deep learning methods. Knowledge of extensive coding in Matlab/Python/C++ and prior machine learning experience is desired. He/she will have the opportunity to be involved in multiple NIH funded projects at the School of Medicine alongside and acquire new skills and expertise. The Research Associate will have a chance to present and apply for a multitude of conferences and seminars to showcase his/her research

ESSENTIAL FUNCTIONS

  1. Organize, design, and implement image analysis architectures for processing digitized histology slides

  2. Develop new and adapt existing algorithms for data analysis and image processing.

  3. Implement processing pipelines for the generation and annotation of tissue images.

  4. Optimize new ways to extract features and use machine learning algorithms for selecting predictive features

  5. Associate findings with clinical data and work on adapting the workflow in the clinical setting for the research.

  6. Generate documentation and version control for software, datasets, and analyses.

  7. Interact with graduate students, post-docs, software developers, pathologists and oncologists in support of research projects and analyses

  8. Assist in the preparation of and/or lead the development of manuscripts, preliminary data, experimental design, and methodology sections for manuscripts and grant proposals.

  9. Participate in, and present research findings at national and international conferences.

 

NONESSENTIAL FUNCTIONS

Perform other duties as assigned.

CONTACTS

Department: Daily interaction with lab members (team environment) (60%)

University: Interaction with faculty on various projects (20%)

External: None

Students: Daily interaction with students who are part of the lab (20%)

SUPERVISORY RESPONSIBILITY

None

QUALIFICATIONS

PhD in Biomedical Engineering or related field

REQUIRED SKILLS

  1. Command of programming platforms as Matlab.

  2. Command of scripting languages such as Python, C++

  3. Knowledge of command line operation and linux/unix operating systems

  4. Knowledge of machine learning and deep learning architecture and algorithms

  5. Knowledge of data management, general database tasks, and “big data” architectures

  6. Basic knowledge of statistics

  7. Strong written and verbal communication skills

 

WORKING CONDITIONS

General office environment.  Limited manual dexterity required.  Work requires negligible physical exertion with no exposure to hazards.  

Interested applicants should contact Pallavi Tiwari at pxt130@case.edu.

In employment, as in education, Case Western Reserve University is committed to Equal Opportunity and Diversity. Women, veterans, members of underrepresented minority groups, and individuals with disabilities are encouraged to apply.

Case Western Reserve University provides reasonable accommodations to applicants with disabilities. Applicants requiring a reasonable accommodation for any part of the application and hiring process should contact the Office of Inclusion, Diversity and Equal Opportunity at 216-368-8877 to request a reasonable accommodation. Determinations as to granting reasonable accommodations for any applicant will be made on a case-by-case basis.